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Niem, Wendy A., and Alan R. Niem. Ages of Rocks in Southwestern Washington and Northwestern Oregon as Indicated by Paleontological and Isotopic Dates In U. S. Geological Survey Open-File Report. Vol. 92-344. Department of the Interior, 1992.
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Picha, Frantisek, and Alan R. Niem. "Distribution and Extent of Beds in Flysch Deposits, Ouachita Mountains, Arkansas and Oklahoma." Journal of Sedimentary Petrology 44, no. 2 (1974): 328-335.
Picha, Frantisek, and Alan R. Niem. "Distribution and Extention of Some Flysch Deposits, Ouachita Mountains, Arkansas and Oklahoma." Geological Society of America Abstracts with Programs 2, no. 7 (1970): 653.
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Oles, Keith F., Granville J. Johnson, Alan R. Niem, and Wendy A. Niem. Geologic Field Trips in Western Oregon and Southwestern Washington In Geological Society of America Cordilleran Section Meeting Bulletin. Vol. 101. Geological Society of America, 1980.
Penoyer, Peter E., and Alan R. Niem. Geology and Ground Water Resources of the Kings Valley Area, Central Oregon Coast Range, Oregon In Water Resources Research Institute Report. Vol. WRRI-39. Oregon State University Department of Geology, 1975.
Niem, Alan R., and Wendy A. Niem. Geology and Oil, Gas, and Coal Resources, Southern Tyee Basin, Southern Coast Range, Oregon In U. S. Geological Survey Open-File Report. Vol. O-90-3. Department of the Interior, 1990.
Niem, Alan R., and Parke D. Jr. Snavely. "Geology and Preliminary Hydrocarbon Evaluation of the Teritary Juan de Fuca Basin, Olympic Peninsula, Northwest Washington." Washington Geology 19, no. 4 (1991): 27-55.
Niem, Alan R., and Parke D. Jr. Snavely. Geology and Preliminary Hydrocarbon Evaluation of the Tertiary Juan de Fuca Basin, Olympic Peninsula, Northwest Washington., 1991.
Niem, Alan R., Jerry Simonson, Moyle E. Harward, Wendy A. Niem, Bob Tullock, and Jerry Kling. Geology and Soils Field Trip to Oregon Coast and Coast Range In 13th Annual Meeting of the Clay Minerals Society. Oregon State University, 1976.
Wells, Ray E., and Alan R. Niem. "Geology of the Columbia River Basalt Group in the Astoria Basin, Oregon and Washington: Evidence for Invasive Flows." GSA Abstract Form (1987).
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Niem, Alan R., Wendy A. Niem, and In-Chang Ryu. Hydrocarbon Potential of the Tertiary Southern Tyee Basin, Southwest Oregon In 6th Annual Northwest Petroleum Association Symposium. Roseburg, Oregon, 1990.
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Niem, Alan R., Parke D. Jr. Snavely, Ying Chen, and Wendy A. Niem. "Jansen Creek Member of the Makah Formation - A Major Oligocene Submarine Landslide or Slump Deposit from the Vancouver Shelf in the Juan de Fuca Deep Marginal Basin, Northwest Olympic Peninsula, Washington." Geological Society of America Abstracts with Programs 21, no. 5 (1989): 123.
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Niem, Alan R., and Jr. Cressy, Frank B.. "K-Ar Dates for Sills from the Neahkahnie Mountain and Tillamook Head Areas of the Northwestern Oregon Coast." Isochron/West 7 (1973): 13-15.
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Niem, Alan R.. "Mississippian Pyroclastic Flow and Ash-fall Deposits in the Deep-Marine Ouachita Flysch Basin, Oklahoma and Arkansas." Geological Society of America Bulletin 88 (1977): 49-61.
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Niem, Alan R., Norman S. Macleod, Parke D. Jr. Snavely, David Huggins, Daniel J. Fortier, Jack H. Meyer, Alan Seeling, and Wendy A. Niem. Onshore-Offshore Geologic Cross Section, Northern Oregon Coast Range to Continental Slope In Department of Geology and Mineral Industries Special Paper. Vol. 26. Oregon Department of Geology and Mineral Industries, 1992.
Niem, Alan R., Norman S. Macleod, Parke D. Jr. Snavely, David Huggins, Daniel J. Fortier, Jack H. Meyer, and Alan Seeling. Onshore-Offshore Geologic Cross Section, Northern Oregon Coast Range to Continental Slope., 1992.
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Niem, Alan R.. "Patterns of Flysch Deposition and Deep-Sea Fans in the Lower Stanley Group (Mississippian), Ouachita Mountains, Oklahoma and Arkansas." Journal of Sedimentary Petrology 46, no. 3 (1976): 633-646.
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Wells, Ray E., Parke D. Jr. Snavely, and Alan R. Niem. "Quaternary Thrust Faulting at Netarts Bay, Northern Oregon Coast." Geological Society of America Abstracts with Programs 24, no. 5 (1992): 89.
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Niem, Alan R.. Wright's Point, An Example of Inverted Topography., 1974.