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1958
Allen, John Eliot. Columbia River Gorge: Portland to the Dalles In Guidebook for Field Trip Excursions. Geological Society of America, Cordilleran Section, 1958.
1947
Allen, John Eliot. Bibliography of the Geology and Mineral Resources of Oregon In Department of Geology and Mineral Industries Bulletin. Vol. 33. Oregon Department of Geology and Mineral Industries, 1947.
1946
Allen, John Eliot. Geology of the San Juan Bautista Quadrangle, California In Division of Mines Bulletin. Vol. 133. California Department of Natural Resources, 1946.
Allen, John Eliot. Reconnaissance Geology of Limestone Deposits in the Willamette Valley, Oregon In Department of Geology and Mineral Industries Short Paper. Vol. 15. Oregon Department of Geology and Mineral Industries, 1946.
1944
Allen, John Eliot, and Ewart M. Baldwin. Geology and Coal Resources of the Coos Bay Quadrangle, Oregon In Department of Geology and Mineral Industries Bulletin. Vol. 27. Oregon Department of Geology and Mineral Industries, 1944.
1941
Allen, John Eliot. "Geological Investigation of the Chromite Deposits of California." California Journal of Mines and Geology 37 (1941): 101-167.
1939
Allen, John Eliot. First Aid to Fossils or What to Do Before the Paleontologist Comes In Department of Geology and Mineral Industries Bulletin. Vol. 18. Oregon Department of Geology and Mineral Industries, 1939.
1938
Allen, John Eliot. Chromite Deposits in Oregon In Department of Geology and Mineral Industries Bulletin. Vol. 9. Oregon Department of Geology and Mineral Industries, 1938.